#!/bin/sh
# run from directory where this script is
cd `echo $0 | sed 's/\(.*\)\/.*/\1/'` # extract pathname
EXAMPLE_DIR=`pwd`

# check whether echo has the -e option
if test "`echo -e`" = "-e" ; then ECHO=echo ; else ECHO="echo -e" ; fi

$ECHO
$ECHO "$EXAMPLE_DIR : starting"
$ECHO
$ECHO "This example shows how to use pw.x to calculate the total energy"
$ECHO "of LiCoO2 using DFT+U+V with ultrasoft pseudopotentials."
$ECHO

# set the needed environment variables
. ../../../environment_variables

# required executables and pseudopotentials
BIN_LIST="pw.x"
PSEUDO_LIST="Co.pbesol-spn-rrkjus_psl.0.3.1.UPF O.pbesol-n-rrkjus_psl.0.1.UPF Li.pbesol-s-rrkjus_psl.0.2.1.UPF"

$ECHO
$ECHO "  executables directory: $BIN_DIR"
$ECHO "  pseudo directory:      $PSEUDO_DIR"
$ECHO "  temporary directory:   $TMP_DIR"
$ECHO "  checking that needed directories and files exist...\c"

# check for directories
for DIR in "$BIN_DIR" "$PSEUDO_DIR" ; do
    if test ! -d $DIR ; then
        $ECHO
        $ECHO "ERROR: $DIR not existent or not a directory"
        $ECHO "Aborting"
        exit 1
    fi
done
for DIR in "$TMP_DIR" "$EXAMPLE_DIR/results" ; do
    if test ! -d $DIR ; then
        mkdir $DIR
    fi
done
cd $EXAMPLE_DIR/results

# check for executables
for FILE in $BIN_LIST ; do
    if test ! -x $BIN_DIR/$FILE ; then
        $ECHO
        $ECHO "ERROR: $BIN_DIR/$FILE not existent or not executable"
        $ECHO "Aborting"
        exit 1
    fi
done

# check for pseudopotentials
for FILE in $PSEUDO_LIST ; do
    if test ! -r $PSEUDO_DIR/$FILE ; then
       $ECHO
       $ECHO "Downloading $FILE to $PSEUDO_DIR...\c"
            $WGET $PSEUDO_DIR/$FILE $NETWORK_PSEUDO/$FILE 2> /dev/null
    fi
    if test $? != 0; then
        $ECHO
        $ECHO "ERROR: $PSEUDO_DIR/$FILE not existent or not readable"
        $ECHO "Aborting"
        exit 1
    fi
done
$ECHO " done"

# how to run executables
PW_COMMAND="$PARA_PREFIX $BIN_DIR/pw.x $PARA_POSTFIX"
$ECHO
$ECHO "  running pw.x     as: $PW_COMMAND"
$ECHO


# clean TMP_DIR
$ECHO "  cleaning $TMP_DIR...\c"
rm -rf $TMP_DIR/*
$ECHO " done"

PREFIX='LiCoO2'

# self-consistent calculation
cat > $PREFIX.scf.in << EOF
 &control
    calculation='scf'
    restart_mode='from_scratch',
    prefix='$PREFIX'
    pseudo_dir = '$PSEUDO_DIR/'
    outdir='$TMP_DIR/'
    verbosity='high'
 /
 &system
    ibrav = 5,
    celldm(1) = 9.3705,
    celldm(4) = 0.83874,
    nat = 4, 
    ntyp = 3,
    ecutwfc = 50.0
    ecutrho = 400.0
    lda_plus_u = .true.,
    lda_plus_u_kind = 2,
    U_projection_type = 'ortho-atomic',
    Hubbard_V(1,1,1) = 5.0
    Hubbard_V(1,2,1) = 0.8
 /
 &electrons
    conv_thr =  1.d-10
    mixing_beta = 0.7
 /
ATOMIC_SPECIES
Co  59.0   Co.pbesol-spn-rrkjus_psl.0.3.1.UPF 
O   16.0   O.pbesol-n-rrkjus_psl.0.1.UPF 
Li   7.0   Li.pbesol-s-rrkjus_psl.0.2.1.UPF 
ATOMIC_POSITIONS {crystal}
 Co  0.0000000000   0.0000000000   0.0000000000
 O   0.2604885000   0.2604885000   0.2604885000
 O   0.7395115000   0.7395115000   0.7395115000
 Li  0.5000000000   0.5000000000   0.5000000000
K_POINTS {automatic}
 2 2 2 0 0 0
EOF
$ECHO "  Running the SCF calculation for $PREFIX..."
$PW_COMMAND < $PREFIX.scf.in > $PREFIX.scf.out
$ECHO " done"

$ECHO
$ECHO "$EXAMPLE_DIR: done"
